Gene: AT5G23020

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G23020
  • Transcript Identifier AT5G23020.1
  • Gene Type Coding gene
  • Location Chr5 : 7718203-7721634 : positive

Gene Family Information

  • ID HOM05D001792
  • #Genes/#Species 364/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G23020.1
  • symbol IMS2
  • Alias MAM-L,METHYLTHIOALKYMALATE SYNTHASE-LIKE,MAM3
  • uniprot Q9FN52

Descriptions

  • Description 2-isopropylmalate synthase 2
  • Computational description 2-isopropylmalate synthase 2 (IMS2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Alpha-isopropylmalate/homocitrate synthase, conserved site (InterPro:IPR002034), Pyruvate carboxyltransferase (InterPro:IPR000891); BEST Arabidopsis thaliana protein match is: methylthioalkylmalate synthase 1 (TAIR:AT5G23010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019752
IEA
GOA Databasecarboxylic acid metabolic process
GO:0019761
IDA, IMP, IGI
Gene Ontologyglucosinolate biosynthetic process1 2
GO:0009098
TAS
Gene Ontologyleucine biosynthetic process3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0046912
IEA
GOA Databaseacyltransferase, acyl groups converted into alkyl on transfer
GO:0016740
IEA
GOA Databasetransferase activity
GO:0010177
IEA
GOA Database2-(2'-methylthio)ethylmalate synthase activity
GO:0010177
IDA
Gene Ontology2-(2'-methylthio)ethylmalate synthase activity2
GO:0003852
IGI
NAS
Gene Ontology2-isopropylmalate synthase activity1 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA
ISM, IBA
Gene Ontologychloroplast2 4
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013785 Aldolase-type TIM barrel
IPR000891 Pyruvate carboxyltransferase
Mapman id Description
30.1.1.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate synthase