Gene: Solyc05g056030.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g056030.3
  • Transcript Identifier Solyc05g056030.3.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 64795724-64799414 : positive

Gene Family Information

  • ID HOM05D001246
  • #Genes/#Species 500/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g056030.3.1
  • uniprot A0A3Q7GLH5
  • gene_id Solyc05g056030

Descriptions

  • Description Patatin (AHRD V3.3 *** A0A2G3CIZ2_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0016042
IEA
GOA Databaselipid catabolic process
GO:0051707
ISO
PLAZA Integrative Orthologyresponse to other organism AT3G54950
GO:0019374
ISO
PLAZA Integrative Orthologygalactolipid metabolic process AT3G54950
GO:0006644
ISO
PLAZA Integrative Orthologyphospholipid metabolic process AT3G54950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045735
IEA
GOA Databasenutrient reservoir activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G39220
GO:0016298
ISO
PLAZA Integrative Orthologylipase activity AT2G39220
GO:0047617
ISO
PLAZA Integrative Orthologyacyl-CoA hydrolase activity AT3G54950
GO:0004620
ISO
PLAZA Integrative Orthologyphospholipase activity AT2G39220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
IEA
GOA Databasevacuole
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G39220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002641 Patatin-like phospholipase domain
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
Mapman id Description
5.7.2.2.4 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (pPLA2-III)