Gene: AT3G54950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G54950
  • Transcript Identifier AT3G54950.1
  • Gene Type Coding gene
  • Location Chr3 : 20359076-20360774 : negative

Gene Family Information

  • ID HOM05D001246
  • #Genes/#Species 500/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G54950.1
  • symbol pPLAIIIbeta
  • Alias PLA IIIA,patatin-like protein 6,PLP7,PATATIN-LIKE PROTEIN 7
  • full_name patatin-related phospholipase IIIbeta
  • uniprot Q9SV43

Descriptions

  • Description patatin-like protein 6
  • Computational description patatin-like protein 6 (PLA IIIA); CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 6 (TAIR:AT2G39220.1); Has 1058 Blast hits to 1055 proteins in 202 species: Archae - 0; Bacteria - 325; Metazoa - 24; Fungi - 32; Plants - 544; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051707
IEP
Gene Ontologyresponse to other organism1
GO:0006644
IMP
Gene Ontologyphospholipid metabolic process2
GO:0019374
IMP
Gene Ontologygalactolipid metabolic process2
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0040008
IEA
GOA Databaseregulation of growth
GO:0016042
IEA
GOA Databaselipid catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004620
IDA
Gene Ontologyphospholipase activity2
GO:0047617
IDA
Gene Ontologyacyl-CoA hydrolase activity2
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0005886
IDA
Gene Ontologyplasma membrane2
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
IPR002641 Patatin-like phospholipase domain
Mapman id Description
5.7.2.2.4 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (pPLA2-III)