Gene: AT2G39220

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G39220
  • Transcript Identifier AT2G39220.1
  • Gene Type Coding gene
  • Location Chr2 : 16375055-16376663 : negative

Gene Family Information

  • ID HOM05D001246
  • #Genes/#Species 500/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G39220.1
  • symbol PLP6
  • Alias PLA IIB
  • uniprot O80959

Descriptions

  • Description PATATIN-like protein 6
  • Computational description PATATIN-like protein 6 (PLP6); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: metabolic process, lipid metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: patatin-like protein 6 (TAIR:AT3G54950.1); Has 1294 Blast hits to 1292 proteins in 232 species: Archae - 0; Bacteria - 327; Metazoa - 139; Fungi - 43; Plants - 635; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006629
IEA
GOA Databaselipid metabolic process
GO:0006629
IEA
InterProlipid metabolic process
GO:0006952
IEA
GOA Databasedefense response
GO:0016042
IEA
GOA Databaselipid catabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0004620
IDA
Gene Ontologyphospholipase activity2
GO:0016298
IDA
Gene Ontologylipase activity2
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IDA
Gene Ontologyhydrolase activity2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
Gene Ontologyplasma membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002641 Patatin-like phospholipase domain
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
Mapman id Description
5.7.2.2.4 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A2 activities.phospholipase A2 (pPLA2-III)