Gene: Solyc05g054640.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g054640.4
- Transcript Identifier Solyc05g054640.4.1
- Gene Type Coding gene
- Location SL4.0ch05 : 63895888-63900302 : positive
Gene Family Information
- ID HOM05D002389
- #Genes/#Species 284/100
- Phylogenetic origin
- ID ORTHO05D003227
- #Genes/#Species 237/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc05g054640.4.1
- uniprot A0A3Q7HH10
- gene_id Solyc05g054640
Descriptions
- Description 2-oxoglutarate dehydrogenase, E1 component (AHRD V3.3 *** Q9FLH2_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006099 | IBA IEA | GOA Database | tricarboxylic acid cycle | |
| GO:0006099 | IEA | InterPro | tricarboxylic acid cycle | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT5G65750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004591 | IBA IEA | GOA Database | oxoglutarate dehydrogenase (succinyl-transferring) activity | |
| GO:0004591 | IEA | InterPro | oxoglutarate dehydrogenase (succinyl-transferring) activity | |
| GO:0030976 | IEA | GOA Database | thiamine pyrophosphate binding | |
| GO:0030976 | IEA | InterPro | thiamine pyrophosphate binding | |
| GO:0016624 | IEA | GOA Database | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | |
| GO:0016624 | IEA | InterPro | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | |
| GO:0016491 | IEA | GOA Database | oxidoreductase activity | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT5G65750 |
| GO:0050897 | ISO | PLAZA Integrative Orthology | cobalt ion binding | AT5G65750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045252 | IBA | GOA Database | oxoglutarate dehydrogenase complex | |
| GO:0005739 | IBA | GOA Database | mitochondrion |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011603 | 2-oxoglutarate dehydrogenase E1 component |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR001017 | Dehydrogenase, E1 component |
| IPR031717 | Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal |
| IPR042179 | Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily |
| IPR005475 | Transketolase-like, pyrimidine-binding domain |
| Mapman id | Description |
|---|---|
| 2.3.4.1 | Cellular respiration.tricarboxylic acid cycle.2-oxoglutarate dehydrogenase complex.component E1 |