Gene: Solyc05g054630.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g054630.4
  • Transcript Identifier Solyc05g054630.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 63885367-63891590 : positive

Gene Family Information

  • ID HOM05D006356
  • #Genes/#Species 125/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g054630.4.1
  • uniprot A0A3Q7GQ38
  • gene_id Solyc05g054630

Descriptions

  • Description Elongator complex protein 1 (AHRD V3.3 *** A0A2G3CIF0_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008284
ISO
PLAZA Integrative Orthologypositive regulation of cell population proliferation AT5G13680
GO:2000024
ISO
PLAZA Integrative Orthologyregulation of leaf development AT5G13680
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT5G13680
GO:0048530
ISO
PLAZA Integrative Orthologyfruit morphogenesis AT5G13680
GO:0010928
ISO
PLAZA Integrative Orthologyregulation of auxin mediated signaling pathway AT5G13680
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT5G13680
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT5G13680
GO:0031538
ISO
PLAZA Integrative Orthologynegative regulation of anthocyanin metabolic process AT5G13680
GO:0051301
ISO
PLAZA Integrative Orthologycell division AT5G13680
GO:0009965
ISO
PLAZA Integrative Orthologyleaf morphogenesis AT5G13680
GO:0006400
ISO
PLAZA Integrative OrthologytRNA modification AT5G13680
GO:0009787
ISO
PLAZA Integrative Orthologyregulation of abscisic acid-activated signaling pathway AT5G13680
GO:0080178
ISO
PLAZA Integrative Orthology5-carbamoylmethyl uridine residue modification AT5G13680
GO:0002098
IEA
GOA DatabasetRNA wobble uridine modification
GO:0002098
IEA
InterProtRNA wobble uridine modification
GO:0035265
ISO
PLAZA Integrative Orthologyorgan growth AT5G13680
GO:0002926
IBA
GOA DatabasetRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
GO:0008033
IEA
GOA DatabasetRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000049
IBA
GOA DatabasetRNA binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IBA
GOA Databasecytosol
GO:0033588
IBA
IEA
GOA Databaseelongator holoenzyme complex
GO:0033588
IEA
InterProelongator holoenzyme complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005737
IEA
GOA Databasecytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006849 Elongator complex protein 1
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
15.3.5.2.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.ELONGATOR transcription elongation complex.component ELP1