Gene: Solyc05g015220.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g015220.3
- Transcript Identifier Solyc05g015220.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 10125964-10145364 : negative
Gene Family Information
- ID HOM05D004097
- #Genes/#Species 172/96
- Phylogenetic origin
- ID ORTHO05D005352
- #Genes/#Species 159/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc05g015220.3.1
- uniprot A0A3Q7GIC3
- gene_id Solyc05g015220
Descriptions
- Description Mannosyl-oligosaccharide glucosidase GCS1 (AHRD V3.3 *** A0A2G3CQL2_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process | |
| GO:0009913 | ISO | PLAZA Integrative Orthology | epidermal cell differentiation | AT1G67490 |
| GO:0010053 | ISO | PLAZA Integrative Orthology | root epidermal cell differentiation | AT1G67490 |
| GO:0006487 | IBA | GOA Database | protein N-linked glycosylation | |
| GO:0009311 | IEA | GOA Database | oligosaccharide metabolic process | |
| GO:0009311 | IEA | InterPro | oligosaccharide metabolic process | |
| GO:0008152 | IEA | GOA Database | metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004558 | ISO | PLAZA Integrative Orthology | alpha-1,4-glucosidase activity | AT1G67490 |
| GO:0004573 | IBA IEA | GOA Database | mannosyl-oligosaccharide glucosidase activity | |
| GO:0004573 | IEA | InterPro | mannosyl-oligosaccharide glucosidase activity | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G67490 |
| GO:0005789 | IBA | GOA Database | endoplasmic reticulum membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012341 | Six-hairpin glycosidase-like superfamily |
| IPR004888 | Glycoside hydrolase family 63 |
| IPR008928 | Six-hairpin glycosidase superfamily |
| IPR038518 | Glycosyl hydrolase family 63, N-terminal domain superfamily |
| IPR031631 | Glycosyl hydrolase family 63, N-terminal |
| IPR031335 | Glycosyl hydrolase family 63, C-terminal |
| Mapman id | Description |
|---|---|
| 18.1.1.6.1 | Protein modification.glycosylation.N-linked glycosylation.complex N-glycan maturation.class-I glucosidase I |