Gene: Solyc04g079960.1
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc04g079960.1
- Transcript Identifier Solyc04g079960.1.1
- Gene Type Coding gene
- Location SL4.0ch04 : 62252829-62253920 : negative
Gene Family Information
- ID HOM05D000626
- #Genes/#Species 914/100
- Phylogenetic origin
- ID ORTHO05D000824
- #Genes/#Species 593/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc04g079960.1.1
- uniprot A0A3Q7GAW6
- gene_id Solyc04g079960
Descriptions
- Description geranylgeranyl pyrophosphate synthase 2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045337 | ISO | PLAZA Integrative Orthology | farnesyl diphosphate biosynthetic process | AT3G32040 |
| GO:0043693 | ISO | PLAZA Integrative Orthology | monoterpene biosynthetic process | AT4G36810 |
| GO:0008299 | IEA | GOA Database | isoprenoid biosynthetic process | |
| GO:0008299 | IEA | InterPro | isoprenoid biosynthetic process | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G36810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G36810 |
| GO:0044687 | ISO | PLAZA Integrative Orthology | geranylfarnesyl diphosphate synthase activity | AT3G32040 |
| GO:0004161 | ISO | PLAZA Integrative Orthology | dimethylallyltranstransferase activity | AT4G36810 |
| GO:0004659 | IBA | GOA Database | prenyltransferase activity | |
| GO:0004311 | IBA | GOA Database | farnesyltranstransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | AT3G32040 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G36810 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT1G49530 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G32040 |
| GO:0009513 | ISO | PLAZA Integrative Orthology | etioplast | AT3G14550 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT4G36810 |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G23800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |