Gene: Solyc04g015080.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g015080.4
  • Transcript Identifier Solyc04g015080.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 5299048-5302055 : positive

Gene Family Information

  • ID HOM05D006551
  • #Genes/#Species 122/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g015080.4.1
  • uniprot A0A3Q7GRZ6
  • gene_id Solyc04g015080

Descriptions

  • Description oxidoreductase, 2OG-Fe(II) oxygenase family protein (AHRD V3.3 *** AT2G22260.5)
  • Note oxidoreductase, 2OG-Fe(II) oxygenase family protein (AHRD V3.3 *** AT2G22260.5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0035511
IBA
GOA Databaseoxidative DNA demethylation
GO:0006307
IBA
GOA DatabaseDNA dealkylation involved in DNA repair
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT2G22260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051747
IBA
GOA Databasecytosine C-5 DNA demethylase activity
GO:0043734
IBA
GOA DatabaseDNA-N1-methyladenine dioxygenase activity
GO:0008198
IBA
GOA Databaseferrous iron binding
GO:0035514
ISO
PLAZA Integrative OrthologyDNA demethylase activity AT2G22260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR032852 DNA oxidative demethylase ALKBH2
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Mapman id Description
35.1 not assigned.annotated