Gene: AT2G22260

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G22260
  • Transcript Identifier AT2G22260.5
  • Gene Type Coding gene
  • Location Chr2 : 9461342-9463053 : positive

Gene Family Information

  • ID HOM05D006551
  • #Genes/#Species 122/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G22260.5
  • symbol ALKBH2
  • full_name homolog of E. coli alkB
  • uniprot Q9SIE0

Descriptions

  • Description oxidoreductase, 2OG-Fe(II) oxygenase family protein
  • Computational description oxidoreductase, 2OG-Fe(II) oxygenase family protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 1561 Blast hits to 1561 proteins in 515 species: Archae - 0; Bacteria - 839; Metazoa - 118; Fungi - 181; Plants - 86; Viruses - 14; Other Eukaryotes - 323 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IDA
IEA
Gene OntologyDNA repair1
GO:0006281
IEA
InterProDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0035511
IBA
Gene Ontologyoxidative DNA demethylation2
GO:0006307
IBA
Gene OntologyDNA dealkylation involved in DNA repair2
GO:0080111
IDA
Gene OntologyDNA demethylation1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043734
IBA
Gene OntologyDNA-N1-methyladenine dioxygenase activity2
GO:0016491
IEA
GOA Databaseoxidoreductase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051213
IEA
GOA Databasedioxygenase activity
GO:0103053
IEA
GOA Database1-ethyladenine demethylase activity
GO:0051747
IBA
Gene Ontologycytosine C-5 DNA demethylase activity2
GO:0008198
IBA
Gene Ontologyferrous iron binding2
GO:0035514
IDA
Gene OntologyDNA demethylase activity1
GO:0035516
IEA
Gene Ontologyoxidative DNA demethylase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like
IPR032852 DNA oxidative demethylase ALKBH2
IPR025131 Domain of unknown function DUF4057
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Mapman id Description
35.1 not assigned.annotated