Gene: Solyc02g087290.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087290.3
  • Transcript Identifier Solyc02g087290.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 47765770-47770890 : negative

Gene Family Information

  • ID HOM05D000877
  • #Genes/#Species 679/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087290.3.1
  • uniprot A0A3Q7F8G5
  • gene_id Solyc02g087290

Descriptions

  • Description Alpha-mannosidase (AHRD V3.3 *** A0A2G2XIC1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0006487
ISO
PLAZA Integrative Orthologyprotein N-linked glycosylation AT5G14950
GO:0042538
ISO
PLAZA Integrative Orthologyhyperosmotic salinity response AT5G14950
GO:0006517
IBA
GOA Databaseprotein deglycosylation
GO:0006491
IBA
GOA DatabaseN-glycan processing
GO:0006013
IEA
GOA Databasemannose metabolic process
GO:0006013
IEA
InterPromannose metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G14950
GO:0004559
IBA
IEA
GOA Databasealpha-mannosidase activity
GO:0004559
IEA
InterProalpha-mannosidase activity
GO:0030246
IEA
GOA Databasecarbohydrate binding
GO:0030246
IEA
InterProcarbohydrate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G14950
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT5G14950
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT5G14950
GO:0000139
IBA
GOA DatabaseGolgi membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011682 Glycosyl hydrolase family 38, C-terminal
IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel
IPR011013 Galactose mutarotase-like domain superfamily
IPR015341 Glycoside hydrolase family 38, central domain
IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily
IPR013780 Glycosyl hydrolase, all-beta
IPR000602 Glycoside hydrolase family 38, N-terminal domain
IPR037094 Glycoside hydrolase family 38, central domain superfamily
IPR028995 Glycoside hydrolase families 57/38, central domain superfamily
Mapman id Description
18.1.1.6.4 Protein modification.glycosylation.N-linked glycosylation.complex N-glycan maturation.class-II alpha-mannosidase II