Gene: Solyc01g107510.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g107510.3
- Transcript Identifier Solyc01g107510.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 87337650-87351374 : positive
Gene Family Information
- ID HOM05D004852
- #Genes/#Species 152/97
- Phylogenetic origin
- ID ORTHO05D006128
- #Genes/#Species 147/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g107510.3.1
- uniprot A0A3Q7ES14
- gene_id Solyc01g107510
Descriptions
- Description DNA repair protein REV1 (AHRD V3.3 *** A0A2G2Y2A0_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT5G44750 |
| GO:0070987 | IBA | GOA Database | error-free translesion synthesis | |
| GO:0042276 | IBA IEA | GOA Database | error-prone translesion synthesis | |
| GO:0042276 | IEA | InterPro | error-prone translesion synthesis | |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0071897 | IEA | GOA Database | DNA biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0017125 | IBA | GOA Database | deoxycytidyl transferase activity | |
| GO:0003887 | IBA | GOA Database | DNA-directed DNA polymerase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity | |
| GO:0016779 | IEA | GOA Database | nucleotidyltransferase activity | |
| GO:0016779 | IEA | InterPro | nucleotidyltransferase activity | |
| GO:0003684 | IEA | GOA Database | damaged DNA binding | |
| GO:0003684 | IEA | InterPro | damaged DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001357 | BRCT domain |
| IPR036420 | BRCT domain superfamily |
| IPR043502 | DNA/RNA polymerase superfamily |
| IPR001126 | UmuC domain |
| IPR036775 | DNA polymerase, Y-family, little finger domain superfamily |
| IPR043128 | Reverse transcriptase/Diguanylate cyclase domain |
| IPR017961 | DNA polymerase, Y-family, little finger domain |
| IPR012112 | DNA repair protein Rev1 |
| Mapman id | Description |
|---|---|
| 14.2.5 | DNA damage response.DNA repair polymerase activities.DNA polymerase (REV1) |