Gene: Solyc01g088020.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088020.3
  • Transcript Identifier Solyc01g088020.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75111786-75124761 : positive

Gene Family Information

  • ID HOM05D001978
  • #Genes/#Species 334/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088020.3.1
  • uniprot A0A3Q7EJU7
  • gene_id Solyc01g088020

Descriptions

  • Description Protein transport protein SEC31-like protein B (AHRD V3.3 *** A0A2G3AKI6_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0090110
IBA
GOA DatabaseCOPII-coated vesicle cargo loading
GO:0006886
IBA
GOA Databaseintracellular protein transport
GO:0007029
IBA
GOA Databaseendoplasmic reticulum organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0005198
IBA
GOA Databasestructural molecule activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0030127
IBA
GOA DatabaseCOPII vesicle coat
GO:0070971
IBA
GOA Databaseendoplasmic reticulum exit site
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G63460
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G63460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR040251 Protein transport protein SEC31-like
IPR024298 Ancestral coatomer element 1, Sec16/Sec31
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
22.1.1.1.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.scaffolding component Sec31