Gene: Solyc01g028860.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g028860.3
- Transcript Identifier Solyc01g028860.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 36926987-36930590 : positive
Gene Family Information
- ID HOM05D000412
- #Genes/#Species 1233/100
- Phylogenetic origin
- ID ORTHO05D000429
- #Genes/#Species 945/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g028860.3.1
- uniprot A0A3Q7ED53
- gene_id Solyc01g028860
Descriptions
- Description Evolutionarily conserved C-terminal region 2 (AHRD V3.3 *** F4JDC2_ARATH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0061157 | IBA | GOA Database | mRNA destabilization | |
| GO:0019722 | ISO | PLAZA Integrative Orthology | calcium-mediated signaling | AT3G03950 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | IBA | GOA Database | mRNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G13460 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IBA | GOA Database | cytoplasm | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G13460 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G55500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007275 | YTH domain |
| Mapman id | Description |
|---|---|
| 16.5.8.2.1 | RNA processing.RNA modification.mRNA methylation.N6-methyladenosine methylation reading.methylation reader (ECT) |