Gene: AT1G55500

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G55500
  • Transcript Identifier AT1G55500.5
  • Gene Type Coding gene
  • Location Chr1 : 20719747-20722450 : positive

Gene Family Information

  • ID HOM05D000412
  • #Genes/#Species 1233/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G55500.5
  • symbol ECT4
  • uniprot F4I0C2

Descriptions

  • Description evolutionarily conserved C-terminal region 4
  • Computational description evolutionarily conserved C-terminal region 4 (ECT4); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 2 (TAIR:AT3G13460.1); Has 1490 Blast hits to 1324 proteins in 197 species: Archae - 2; Bacteria - 19; Metazoa - 721; Fungi - 248; Plants - 363; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061157
IBA
Gene OntologymRNA destabilization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
Gene OntologyRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IDA, HDA
IBA
Gene OntologymRNA binding1 2 3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
Gene Ontologycytoplasm1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007275 YTH domain
Mapman id Description
16.5.8.2.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine methylation reading.methylation reader (ECT)