Gene: Solyc01g007860.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g007860.3
  • Transcript Identifier Solyc01g007860.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1969758-1973027 : negative

Gene Family Information

  • ID HOM05D001590
  • #Genes/#Species 404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g007860.3.1
  • uniprot A0A3Q7E8N9
  • gene_id Solyc01g007860

Descriptions

  • Description Ubiquitin-conjugating enzyme variant (AHRD V3.3 *** C8CP48_CITSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070534
IBA
GOA Databaseprotein K63-linked ubiquitination
GO:0006301
IBA
GOA Databasepostreplication repair
GO:0000209
IBA
GOA Databaseprotein polyubiquitination
GO:1902916
ISO
PLAZA Integrative Orthologypositive regulation of protein polyubiquitination AT2G36060
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT3G52560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G36060

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0031372
ISO
PLAZA Integrative OrthologyUBC13-MMS2 complex AT2G36060
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G36060

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000608 Ubiquitin-conjugating enzyme E2
IPR016135 Ubiquitin-conjugating enzyme/RWD-like
Mapman id Description
19.2.2.1.5.1.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).polyubiquitination.Ubc13-Uev1 conjugating E2 complex.component Uev1