Gene: Solyc01g007850.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g007850.2
  • Transcript Identifier Solyc01g007850.2.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1962463-1965519 : positive

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g007850.2.1
  • uniprot A0A3Q7ERZ6
  • gene_id Solyc01g007850

Descriptions

  • Description Pentatricopeptide repeat (AHRD V3.3 *** A0A200QMV9_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
IBA
GOA DatabaseRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043231
IBA
GOA Databaseintracellular membrane-bounded organelle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
35.1 not assigned.annotated