Gene: Solyc01g006100.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006100.4
  • Transcript Identifier Solyc01g006100.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 766537-774402 : negative

Gene Family Information

  • ID HOM05D001165
  • #Genes/#Species 531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006100.4.1
  • uniprot A0A3Q7E7N6
  • gene_id Solyc01g006100

Descriptions

  • Description cytosine-5 DNA methyltransferase1L
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine Os10g0104900
GO:0010069
ISO
PLAZA Integrative Orthologyzygote asymmetric cytokinesis in embryo sac AT1G69770
GO:0051567
ISO
PLAZA Integrative Orthologyhistone H3-K9 methylation AT1G69770
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation Os10g0104900
GO:0010425
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine within a CNG sequence AT1G69770
GO:0006342
ISO
PLAZA Integrative Orthologychromatin silencing AT1G69770
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT1G69770
GO:0045814
ISO
PLAZA Integrative Orthologynegative regulation of gene expression, epigenetic AT1G69770
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G80740
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0090116
IEA
GOA DatabaseC-5 methylation of cytosine
GO:0009836
IDA
Gene Ontologyfruit ripening, climacteric1
GO:0010154
IDA
Gene Ontologyfruit development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0003682
IEA
GOA Databasechromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0003886
IEA
GOA DatabaseDNA (cytosine-5-)-methyltransferase activity
GO:0003886
IDA
Gene OntologyDNA (cytosine-5-)-methyltransferase activity1
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR001525 C-5 cytosine methyltransferase
IPR001025 Bromo adjacent homology (BAH) domain
IPR016197 Chromo-like domain superfamily
IPR043151 Bromo adjacent homology (BAH) domain superfamily
IPR000953 Chromo/chromo shadow domain
IPR023780 Chromo domain
Mapman id Description
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT)