Gene: Solyc01g006090.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc01g006090.3
Transcript Identifier Solyc01g006090.3.1
Gene Type Coding gene
Location SL4.0ch01 : 764303-765178 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003921
#Genes/#Species 178/96
Phylogenetic origin

ID ORTHO05D004394
#Genes/#Species 182/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc01g006090.3.1
uniprot A0A3Q7E8R3
gene_id Solyc01g006090

Descriptions

Short descriptions
Ortholog descriptions

Description Eukaryotic rRNA processing (AHRD V3.3 *** A0A2U1PZE8_ARTAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042254	IEA	GOA Database	ribosome biogenesis
GO:0006364	IBA	GOA Database	rRNA processing
GO:0042273	IBA	GOA Database	ribosomal large subunit biogenesis

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	ISO	PLAZA Integrative Orthology	RNA binding	AT3G22660
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G22660
GO:0003924	ISO	PLAZA Integrative Orthology	GTPase activity	AT3G22660

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	IBA IEA	GOA Database	nucleolus
GO:0005634	IEA	GOA Database	nucleus
GO:0034399	IBA	GOA Database	nuclear periphery
GO:0030687	IBA	GOA Database	preribosome, large subunit precursor

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR008610	Eukaryotic rRNA processing

Mapman id	Description
17.1.2.2.1.5	Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.assembly factor (EBP2)