Gene: AT1G69770

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G69770
  • Transcript Identifier AT1G69770.1
  • Gene Type Coding gene
  • Location Chr1 : 26248496-26253519 : negative

Gene Family Information

  • ID HOM05D001165
  • #Genes/#Species 531/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G69770.1
  • symbol CMT3
  • uniprot Q94F88

Descriptions

  • Description chromomethylase 3
  • Computational description chromomethylase 3 (CMT3); FUNCTIONS IN: DNA (cytosine-5-)-methyltransferase activity; INVOLVED IN: in 6 processes; LOCATED IN: chromatin, nucleus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA methylase, C-5 cytosine-specific (InterPro:IPR001525), Chromo domain-like (InterPro:IPR016197), Bromo adjacent homology (BAH) domain (InterPro:IPR001025), DNA methylase, C-5 cytosine-specific, active site (InterPro:IPR018117), Chromo domain (InterPro:IPR000953); BEST Arabidopsis thaliana protein match is: chromomethylase 2 (TAIR:AT4G19020.1); Has 4337 Blast hits to 3739 proteins in 974 species: Archae - 208; Bacteria - 2545; Metazoa - 230; Fungi - 161; Plants - 416; Viruses - 30; Other Eukaryotes - 747 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine Os10g0104900
GO:0010216
ISO
PLAZA Integrative Orthologymaintenance of DNA methylation Os10g0104900
GO:0009836
ISO
PLAZA Integrative Orthologyfruit ripening, climacteric Solyc01g006100.4
GO:0010154
ISO
PLAZA Integrative Orthologyfruit development Solyc01g006100.4
GO:0032259
IEA
GOA Databasemethylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0090116
IEA
GOA DatabaseC-5 methylation of cytosine
GO:0051567
IGI
Gene Ontologyhistone H3-K9 methylation1
GO:0010069
IMP
Gene Ontologyzygote asymmetric cytokinesis in embryo sac2
GO:0006306
IMP
Gene OntologyDNA methylation3
GO:0045814
IGI
Gene Ontologynegative regulation of gene expression, epigenetic4
GO:0010425
IMP
Gene OntologyDNA methylation on cytosine within a CNG sequence4
GO:0006342
IGI
Gene Ontologychromatin silencing4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003682
IEA
Gene Ontologychromatin binding
GO:0003682
IEA
InterProchromatin binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003886
IEA
GOA DatabaseDNA (cytosine-5-)-methyltransferase activity
GO:0003886
IMP
Gene OntologyDNA (cytosine-5-)-methyltransferase activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001525 C-5 cytosine methyltransferase
IPR001025 Bromo adjacent homology (BAH) domain
IPR000953 Chromo/chromo shadow domain
IPR016197 Chromo-like domain superfamily
IPR023780 Chromo domain
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR043151 Bromo adjacent homology (BAH) domain superfamily
Mapman id Description
12.5.2.4 Chromatin organisation.DNA methylation.RNA-independent DNA methylation.DNA chromomethylase (CMT)