Gene: Sc11g0001370

General Information

Structural Information

  • Species Simmondsia chinensis
  • Gene Identifier Sc11g0001370
  • Transcript Identifier Sc11g0001370.01
  • Gene Type Coding gene
  • Location GWHAASQ00000011 : 1817871-1832935 : negative

Gene Family Information

  • ID HOM05D005206
  • #Genes/#Species 145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sc11g0001370.01

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0097510
ISO
PLAZA Integrative Orthologybase-excision repair, AP site formation via deaminated base removal Os06g0237200
GO:0006289
ISO
PLAZA Integrative Orthologynucleotide-excision repair AT1G10520
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT1G10520
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G10520
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G10520

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0034061
IEA
InterProDNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G10520
GO:0051575
ISO
PLAZA Integrative Orthology5'-deoxyribose-5-phosphate lyase activity Os06g0237200
GO:0030145
ISO
PLAZA Integrative Orthologymanganese ion binding Os06g0237200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036420 BRCT domain superfamily
IPR027421 DNA polymerase lambda lyase domain superfamily
IPR029398 DNA polymerase beta, thumb domain
IPR028207 DNA polymerase beta, palm domain
IPR002054 DNA-directed DNA polymerase X
IPR010996 DNA polymerase beta-like, N-terminal domain
IPR001357 BRCT domain
IPR022312 DNA polymerase family X
IPR043519 Nucleotidyltransferase superfamily
IPR018944 DNA polymerase lambda, fingers domain
IPR002008 DNA polymerase family X, beta-like
IPR037160 DNA polymerase, thumb domain superfamily
Mapman id Description
14.2.4 DNA damage response.DNA repair polymerase activities.DNA polymerase lambda (POLL)