Gene: Os06g0237200

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0237200
  • Transcript Identifier Os06t0237200-00
  • Gene Type Coding gene
  • Location chr06 : 7128403-7133469 : negative

Gene Family Information

  • ID HOM05D005206
  • #Genes/#Species 145/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0237200-00
  • MSU-ID LOC_Os06g13020.2
  • MSU-ID LOC_Os06g13020.1
  • uniprot Q67VC8

Descriptions

  • Description Similar to DNA polymerase lambda.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0097510
IDA
GOA Databasebase-excision repair, AP site formation via deaminated base removal
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT1G10520
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT1G10520
GO:0006289
ISO
PLAZA Integrative Orthologynucleotide-excision repair AT1G10520
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0006303
IBA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0071897
IEA
GOA DatabaseDNA biosynthetic process
GO:0006260
IEA
GOA DatabaseDNA replication

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034061
IEA
GOA DatabaseDNA polymerase activity
GO:0034061
IEA
InterProDNA polymerase activity
GO:0003887
IDA
IBA
IEA
GOA DatabaseDNA-directed DNA polymerase activity
GO:0003887
IEA
InterProDNA-directed DNA polymerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
IPI
GOA Databaseprotein binding
GO:0030145
IDA
GOA Databasemanganese ion binding
GO:0051575
IDA
GOA Database5'-deoxyribose-5-phosphate lyase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002054 DNA-directed DNA polymerase X
IPR028207 DNA polymerase beta, palm domain
IPR029398 DNA polymerase beta, thumb domain
IPR010996 DNA polymerase beta-like, N-terminal domain
IPR036420 BRCT domain superfamily
IPR018944 DNA polymerase lambda, fingers domain
IPR022312 DNA polymerase family X
IPR043519 Nucleotidyltransferase superfamily
IPR002008 DNA polymerase family X, beta-like
IPR037160 DNA polymerase, thumb domain superfamily
IPR027421 DNA polymerase lambda lyase domain superfamily
Mapman id Description
14.2.4 DNA damage response.DNA repair polymerase activities.DNA polymerase lambda (POLL)