Gene: SHI21273

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI21273
  • Transcript Identifier SHI21273-RA
  • Gene Type Coding gene
  • Location scaffold37_5694058 : 3956314-3969168 : negative

Gene Family Information

  • ID HOM05D110609
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D476718
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI21273-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
IEA
InterProDNA repair
GO:0080111
IEA
InterProDNA demethylation
GO:0006284
IEA
InterProbase-excision repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0019104
IEA
InterProDNA N-glycosylase activity
GO:0035514
IEA
InterProDNA demethylase activity
GO:0051539
IEA
InterPro4 iron, 4 sulfur cluster binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011257 DNA glycosylase
IPR028925 Demeter, RRM-fold domain
IPR028924 Permuted single zf-CXXC unit
IPR044811 DNA glycosylase, plant
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
IPR003265 HhH-GPD domain
IPR023170 Helix-hairpin-helix, base-excision DNA repair, C-terminal
Mapman id Description
12.5.3.1 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.methylcytosine-specific DNA glycosylase (ROS1)
14.5.4 DNA damage response.base excision repair (BER).bifunctional DNA glycosylase/lyase (ROS1)