Gene: SHI18504

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI18504
  • Transcript Identifier SHI18504-RA
  • Gene Type Coding gene
  • Location scaffold28_7511268 : 519014-521241 : positive

Gene Family Information

  • ID HOM05D001212
  • #Genes/#Species 516/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI18504-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009727
ISO
PLAZA Integrative Orthologydetection of ethylene stimulus AT4G32040
GO:2000652
ISO
PLAZA Integrative Orthologyregulation of secondary cell wall biogenesis AT1G62990
GO:0010089
ISO
PLAZA Integrative Orthologyxylem development AT1G62990
GO:0071345
ISO
PLAZA Integrative Orthologycellular response to cytokine stimulus AT5G25220
GO:0010214
ISO
PLAZA Integrative Orthologyseed coat development AT1G62990
GO:0071369
ISO
PLAZA Integrative Orthologycellular response to ethylene stimulus AT4G32040
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G62990
GO:0009722
ISO
PLAZA Integrative Orthologydetection of cytokinin stimulus AT5G25220
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G25220
GO:0080112
ISO
PLAZA Integrative Orthologyseed growth AT1G62990
GO:0080001
ISO
PLAZA Integrative Orthologymucilage extrusion from seed coat AT1G62990
GO:0010192
ISO
PLAZA Integrative Orthologymucilage biosynthetic process AT1G62990
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G25220
GO:0003677
IEA
InterProDNA binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G62990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G25220
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005540 KNOX1
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
IPR005539 ELK domain
IPR005541 KNOX2
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)