Gene: AT4G32040

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G32040
  • Transcript Identifier AT4G32040.1
  • Gene Type Coding gene
  • Location Chr4 : 15494127-15496009 : positive

Gene Family Information

  • ID HOM05D001212
  • #Genes/#Species 516/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G32040.1
  • symbol KNAT5
  • full_name KNOTTED1-like homeobox gene 5
  • uniprot P48002

Descriptions

  • Description homeobox protein knotted-1-like 5
  • Computational description KNOTTED1-like homeobox gene 5 (KNAT5); CONTAINS InterPro DOMAIN/s: ELK (InterPro:IPR005539), KNOX1 (InterPro:IPR005540), Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), KNOX2 (InterPro:IPR005541), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNOTTED1-like homeobox gene 3 (TAIR:AT5G25220.2); Has 6199 Blast hits to 6196 proteins in 330 species: Archae - 0; Bacteria - 0; Metazoa - 2065; Fungi - 300; Plants - 3657; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009727
IEP
Gene Ontologydetection of ethylene stimulus1
GO:0071369
IDA
Gene Ontologycellular response to ethylene stimulus2
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II3
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity4
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific3
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding3
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005541 KNOX2
IPR005539 ELK domain
IPR009057 Homeobox-like domain superfamily
IPR005540 KNOX1
IPR001356 Homeobox domain
IPR008422 Homeobox KN domain
Mapman id Description
15.5.3.4 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (KNOX)