Gene: SHI02163

General Information

Structural Information

  • Species Sapria himalayana
  • Gene Identifier SHI02163
  • Transcript Identifier SHI02163-RA
  • Gene Type Coding gene
  • Location scaffold3_21451142 : 14230163-14235863 : negative

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid SHI02163-RA

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT3G52590
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT5G03240
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G31340
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G20620
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT4G05320
GO:0009751
ISO
PLAZA Integrative Orthologyresponse to salicylic acid AT4G05320
GO:0045116
ISO
PLAZA Integrative Orthologyprotein neddylation AT1G31340
GO:0006464
ISO
PLAZA Integrative Orthologycellular protein modification process AT4G05320
GO:0009693
ISO
PLAZA Integrative Orthologyethylene biosynthetic process AT1G31340
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G31340

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G36170
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT2G36170
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G09790
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G31340
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT3G09790
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G31340
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G09790
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT5G37640
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G36170
GO:0022625
ISO
PLAZA Integrative Orthologycytosolic large ribosomal subunit AT2G36170

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR019956 Ubiquitin domain
IPR000626 Ubiquitin-like domain
Mapman id Description
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)