Gene: AT4G05320

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G05320
  • Transcript Identifier AT4G05320.2
  • Gene Type Coding gene
  • Location Chr4 : 2718559-2719932 : positive

Gene Family Information

  • ID HOM05D000218
  • #Genes/#Species 1867/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G05320.2
  • symbol UBQ10
  • Alias UBI10,ubiquitin 10
  • uniprot Q8H159

Descriptions

  • Description polyubiquitin 10
  • Computational description polyubiquitin 10 (UBQ10); INVOLVED IN: protein modification process, aging, response to salicylic acid stimulus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 32669 Blast hits to 7219 proteins in 726 species: Archae - 0; Bacteria - 99; Metazoa - 15287; Fungi - 3767; Plants - 6623; Viruses - 815; Other Eukaryotes - 6078 (source: NCBI BLink).
  • Computational description polyubiquitin 10 (UBQ10); CONTAINS InterPro DOMAIN/s: Ubiquitin subgroup (InterPro:IPR019956), Ubiquitin conserved site (InterPro:IPR019954), Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: ubiquitin 4 (TAIR:AT5G20620.1); Has 39163 Blast hits to 7228 proteins in 725 species: Archae - 0; Bacteria - 126; Metazoa - 18170; Fungi - 4568; Plants - 8003; Viruses - 978; Other Eukaryotes - 7318 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009751
IEP
Gene Ontologyresponse to salicylic acid1
GO:0006464
TAS
Gene Ontologycellular protein modification process2
GO:0007568
IEP
Gene Ontologyaging3
GO:0016567
IBA
Gene Ontologyprotein ubiquitination4
GO:0019941
IBA
Gene Ontologymodification-dependent protein catabolic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding5
GO:0031386
IBA
Gene Ontologyprotein tag4
GO:0031625
IBA
Gene Ontologyubiquitin protein ligase binding4
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
HDA
Gene Ontologycytosol6
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IBA
Gene Ontologycytoplasm4
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IBA
Gene Ontologynucleus4
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G02890
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT4G05050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR000626 Ubiquitin-like domain
IPR019956 Ubiquitin domain
Mapman id Description
19.2.2.1.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)