Gene: SGA_v2.0_scaffold90G27950

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold90G27950
  • Transcript Identifier SGA_v2.0_scaffold90T27950
  • Gene Type Coding gene
  • Location scaffold90 : 1872804-1876264 : positive

Gene Family Information

  • ID HOM05D000622
  • #Genes/#Species 916/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Nuclear transport factor 2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090332
ISO
PLAZA Integrative Orthologystomatal closure AT5G48650
GO:1900425
ISO
PLAZA Integrative Orthologynegative regulation of defense response to bacterium AT5G48650

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D000622
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G03640

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G07250
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G48650
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G48650

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018222 Nuclear transport factor 2, eukaryote
IPR036047 F-box-like domain superfamily
IPR011044 Quinoprotein amine dehydrogenase, beta chain-like
IPR017451 F-box associated interaction domain
IPR032710 NTF2-like domain superfamily
IPR002075 Nuclear transport factor 2
IPR039539 Ras GTPase-activating protein-binding protein
Mapman id Description
16.8.1 RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP)