Gene: SGA_v2.0_scaffold7G04147
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold7G04147
- Transcript Identifier SGA_v2.0_scaffold7T04147
- Gene Type Coding gene
- Location scaffold7 : 4118303-4129108 : negative
Gene Family Information
- ID HOM05D002435
- #Genes/#Species 279/99
- Phylogenetic origin
- ID ORTHO05D002550
- #Genes/#Species 280/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Eukaryotic translation initiation factor 3 subunit C
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | InterPro | translational initiation | |
| GO:0006086 | IEA | InterPro | acetyl-CoA biosynthetic process from pyruvate |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0031369 | IEA | InterPro | translation initiation factor binding | |
| GO:0004739 | IEA | InterPro | pyruvate dehydrogenase (acetyl-transferring) activity | |
| GO:0016624 | IEA | InterPro | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G56150 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G56150 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex | |
| GO:0043231 | IEA | InterPro | intracellular membrane-bounded organelle | |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G56150 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G56150 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR027516 | Eukaryotic translation initiation factor 3 subunit C |
| IPR000717 | Proteasome component (PCI) domain |
| IPR017597 | Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y |
| IPR008905 | Eukaryotic translation initiation factor 3 subunit C, N-terminal domain |
| IPR029061 | Thiamin diphosphate-binding fold |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR001017 | Dehydrogenase, E1 component |
| Mapman id | Description |
|---|---|
| 17.4.1.3.3 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3c |
| 5.1.2.2.1.1 | Lipid metabolism.fatty acid biosynthesis.acetyl-CoA generation.plastidial pyruvate dehydrogenase complex.E1 pyruvate dehydrogenase subcomplex.subunit alpha |