Gene: SGA_v2.0_scaffold4G02415

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold4G02415
  • Transcript Identifier SGA_v2.0_scaffold4T02415
  • Gene Type Coding gene
  • Location scaffold4 : 3397219-3402504 : positive

Gene Family Information

  • ID HOM05D004116
  • #Genes/#Species 171/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product U-box domain-containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0006511
IEA
InterProubiquitin-dependent protein catabolic process
GO:0030433
IEA
InterProubiquitin-dependent ERAD pathway
GO:0031348
ISO
PLAZA Integrative Orthologynegative regulation of defense response AT5G15400

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0034450
IEA
InterProubiquitin-ubiquitin ligase activity
GO:0061630
ISO
PLAZA Integrative Orthologyubiquitin protein ligase activity AT5G15400

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000151
IEA
InterProubiquitin ligase complex
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G15400
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G15400
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G15400

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003613 U box domain
IPR019474 Ubiquitin conjugation factor E4, core
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR045132 Ubiquitin conjugation factor E4
Mapman id Description
19.2.4.2.3.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).substrate processing.E4 multiubiquitination enzyme (UFD2)