Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold413G51160 scaffold413 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G14160 LG-11 + View
Acer truncatum Atru.chr8.371 chr8 - View
Actinidia chinensis Actinidia17574 Lachesis_group21 + View
Actinidia chinensis Actinidia26244 Lachesis_group3 + View
Arabidopsis lyrata AL6G26260 scaffold_6 - View
Avicennia marina MSTRG.23904 ScioBoG_3895_HRSCAF_3912 + View
Aquilegia oxysepala Aqoxy3G03559 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M1DWNQ K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) arahy.Tifrunner.gnm1.Arahy.20 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JWLU7F K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT5G15400 U-box domain-containing protein U-box domain-containing protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C ubiquitin-ubiquitin ligase activity%3B INVOLVED IN: protein ubiquitination%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin conjugation factor E4%2C core (InterPro:IPR019474)%2C U box domain (InterPro:IPR003613)%3B Has 1036 Blast hits to 1011 proteins in 209 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 503%3B Fungi - 218%3B Plants - 177%3B Viruses - 0%3B Other Eukaryotes - 138 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC04g24243 ChrC04 - View
Brassica napus C09p61720 C09 + View
Brassica napus C02p07680 C02 - View
Brassica napus A02p03010 A02 - View
Brassica oleracea BolC2t06699H C2 - View
Brassica oleracea BolC9t59011H C9 + View
Brassica rapa BraA02t05272Z A02 - View
Beta vulgaris EL10Ac2g03047 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Chr2_EL10_PGA_scaffold6 - View
Camellia sinensis var. sinensis CSS0030715 PREDICTED: probable ubiquitin conjugation factor E4 [Nicotiana tomentosiformis] Chr2 - View
Capsicum annuum CAN.G206.195 PGAv.1.6.scaffold206 - View
Cannabis sativa CANSAT64G2358 NC_044379.1 - View
Corylus avellana Haze_14475 Similar to PUB1: Probable ubiquitin conjugation factor E4 (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g03830 Probable ubiquitin conjugation factor E4 chr7 - View
Citrus clementina Ciclev10010958m.g scaffold_6 + View
Ceratophyllum demersum CDE04G3780 2 + View
Carpinus fangiana Cfa007620 Cfa03 - View
Cardamine hirsuta CARHR197910 Ubiquitin conjugation factor E4 Chr6 + View
Carya illinoinensis CiPaw.03G091800 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Chr03 + View
Chenopodium quinoa AUR62018140 PUB1: Probable ubiquitin conjugation factor E4 C_Quinoa_Scaffold_2048 - View
Chenopodium quinoa AUR62034478 PUB1: Probable ubiquitin conjugation factor E4 C_Quinoa_Scaffold_2742 - View
Capsella rubella Carub.0006s1357 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) scaffold_6 - View
Davidia involucrata Dinv11490 GWHABJS00000012 + View
Davidia involucrata Dinv33806 GWHABJS00000014 - View
Durio zibethinus Duzib147G0424 NW_019168470.1 + View
Durio zibethinus Duzib264G1228 NW_019167960.1 - View
Eucalyptus grandis Eucgr.I01989 Chr09 + View
Erythranthe guttata Migut.H00657 scaffold_8 + View
Eutrema salsugineum Thhalv10012542m.g K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) scaffold_2 - View
Fragaria x ananassa FAN14G3940 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Fvb6-1 - View
Fragaria x ananassa FAN05G0837 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Fvb6-3 - View
Fragaria x ananassa FAN02G1010 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Fvb6-4 + View
Fragaria x ananassa FAN09G3106 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Fvb6-2 + View
Fragaria vesca FvH4_6g47550 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Fvb6 + View
Gossypium hirsutum Gohir.D09G011100 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) D09 - View
Gossypium hirsutum Gohir.A09G012200 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) A09 - View
Glycine max Glyma.13G059200 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Gm13 + View
Gossypium raimondii Gorai.006G012900 Chr06 - View
Lupinus albus Lalb_Chr21g0318471 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Lalb_Chr21 + View
Lotus japonicus Lj2g0025037 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) chr2 + View
Lonicera japonica Lj4C115G25 GWHAAZE00000004 - View
Lonicera japonica Lju41A7G39 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_4_170201 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Lsat_1_v8_lg_4 - View
Malus domestica MD17G1056200 U-box domain-containing protein Chr17 - View
Malus domestica MD09G1060800 U-box domain-containing protein Chr09 - View
Medicago truncatula Medtr6g013690 ubiquitin conjugation factor E4, putative chr6 - View
Nelumbo nucifera Nn4g23336 chr4 - View
Nicotiana tabacum Nitab4.5_0000565g0080 Zinc finger, RING/FYVE/PHD-type, Ubiquitin conjugation factor E4, core, U box domain Nitab4.5_0000565 - View
Petunia axillaris Peaxi162Scf00166g00825 Ubiquitin conjugation factor E4 B Peaxi162Scf00166 + View
Punica granatum PGR004G0109 NC_045131.1 + View
Prunus persica Prupe.3G259400 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Pp03 + View
Populus trichocarpa Potri.017G089600 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Chr17 - View
Populus trichocarpa Potri.004G121200 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Chr04 + View
Phaseolus vulgaris Phvul.004G033100 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) Chr04 - View
Quercus lobata QL02p039361 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0166651 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0073200 chr08 - View
Salix brachista Sabra17G0078900 GWHAAZH00000017 - View
Simmondsia chinensis Sc10g0003320 GWHAASQ00000010 + View
Solanum lycopersicum Solyc02g088550.4 Ubiquitin conjugation factor E4 (AHRD V3.3 *-* R4XJD8_TAPDE) SL4.0ch02 - View
Schrenkiella parvula Sp6g28690 K10597 - ubiquitin conjugation factor E4 B (UBE4B, UFD2) ch6-6 + View
Solanum pennellii Sopen02g033270 U-box domain-containing protein | FUNCTIONS IN: ubiquitin-protein ligase activity, ubiquitin-ubiquitin ligase activity | INVOLVED IN: protein ubiquitination, ubiquitin-dependent protein catabolic process | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ubiquitin conjugation factor E4, core , U box domain Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400001440 Ubiquitin-protein ligase ST4.03ch02 + View
Trochodendron aralioides TAR622G0429 group8 + View
Theobroma cacao Thecc.04G090300 U-box domain-containing protein Chromosome_4 - View
Tripterygium wilfordii TWI60G1537 NC_052246.1 - View
Tripterygium wilfordii TWI34G1118 NC_052235.1 + View
Vigna mungo VMungo0464G1725 CM024077.1 + View
Vanilla planifolia HPP92_023626 Ubiquitin conjugation factor E4, putative *** CM028161.1 - View
Vitis vinifera GSVIVG01011484001 chr14 - View