Gene: SGA_v2.0_scaffold40G15642
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold40G15642
- Transcript Identifier SGA_v2.0_scaffold40T15642
- Gene Type Coding gene
- Location scaffold40 : 1968828-1983371 : positive
Gene Family Information
- ID HOM05D002575
- #Genes/#Species 264/97
- Phylogenetic origin
- ID ORTHO05D005851
- #Genes/#Species 151/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product Sec23/Sec24 protein transport family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G10170 |
| GO:0009642 | ISO | PLAZA Integrative Orthology | response to light intensity | AT1G10170 |
| GO:0009697 | ISO | PLAZA Integrative Orthology | salicylic acid biosynthetic process | AT1G10170 |
| GO:0010310 | ISO | PLAZA Integrative Orthology | regulation of hydrogen peroxide metabolic process | AT1G10170 |
| GO:0042742 | ISO | PLAZA Integrative Orthology | defense response to bacterium | AT1G10170 |
| GO:0010188 | ISO | PLAZA Integrative Orthology | response to microbial phytotoxin | AT1G10170 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G10170 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G10170 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0030127 | IEA | InterPro | COPII vesicle coat |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034078 | Transcription factor NFX1 family |
| IPR000967 | Zinc finger, NF-X1-type |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR007123 | Gelsolin-like domain |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| Mapman id | Description |
|---|---|
| 15.5.51.5 | RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1) |
| 22.1.1.1.3.2 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24 |