Gene: SGA_v2.0_scaffold40G15642

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold40G15642
  • Transcript Identifier SGA_v2.0_scaffold40T15642
  • Gene Type Coding gene
  • Location scaffold40 : 1968828-1983371 : positive

Gene Family Information

  • ID HOM05D002575
  • #Genes/#Species 264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Sec23/Sec24 protein transport family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G10170
GO:0009642
ISO
PLAZA Integrative Orthologyresponse to light intensity AT1G10170
GO:0009697
ISO
PLAZA Integrative Orthologysalicylic acid biosynthetic process AT1G10170
GO:0010310
ISO
PLAZA Integrative Orthologyregulation of hydrogen peroxide metabolic process AT1G10170
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G10170
GO:0010188
ISO
PLAZA Integrative Orthologyresponse to microbial phytotoxin AT1G10170

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G10170
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G10170

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0030127
IEA
InterProCOPII vesicle coat

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034078 Transcription factor NFX1 family
IPR000967 Zinc finger, NF-X1-type
IPR036175 Sec23/Sec24 helical domain superfamily
IPR036180 Gelsolin-like domain superfamily
IPR007123 Gelsolin-like domain
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR036465 von Willebrand factor A-like domain superfamily
IPR006900 Sec23/Sec24, helical domain
IPR006895 Zinc finger, Sec23/Sec24-type
IPR012990 Sec23/Sec24 beta-sandwich
IPR006896 Sec23/Sec24, trunk domain
IPR029006 ADF-H/Gelsolin-like domain superfamily
Mapman id Description
15.5.51.5 RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1)
22.1.1.1.3.2 Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24