Gene: AT1G10170

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G10170
  • Transcript Identifier AT1G10170.2
  • Gene Type Coding gene
  • Location Chr1 : 3333925-3337491 : negative

Gene Family Information

  • ID HOM05D002575
  • #Genes/#Species 264/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G10170.2
  • symbol NFXL1
  • Alias ATNFXL1,NF-X-like 1
  • uniprot Q9SY59

Descriptions

  • Description NF-X-like 1
  • Computational description NF-X-like 1 (NFXL1); FUNCTIONS IN: zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NF-X1-type (InterPro:IPR000967), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;zinc ion binding;sequence-specific DNA binding transcription factors (TAIR:AT5G05660.1); Has 6781 Blast hits to 3735 proteins in 261 species: Archae - 0; Bacteria - 123; Metazoa - 4814; Fungi - 547; Plants - 327; Viruses - 10; Other Eukaryotes - 960 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006952
IEA
GOA Databasedefense response
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0042742
IMP
Gene Ontologydefense response to bacterium2
GO:0010188
IMP
Gene Ontologyresponse to microbial phytotoxin2
GO:0009697
IMP
Gene Ontologysalicylic acid biosynthetic process2
GO:0010310
IMP
Gene Ontologyregulation of hydrogen peroxide metabolic process3
GO:0009651
IMP
Gene Ontologyresponse to salt stress3
GO:0009642
IMP
Gene Ontologyresponse to light intensity3
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4
GO:0003700
IEA
Gene OntologyDNA-binding transcription factor activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0000977
IBA
Gene OntologyRNA polymerase II transcription regulatory region sequence-specific DNA binding1
GO:0003729
IDA, HDA
Gene OntologymRNA binding5 6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM, IBA
IEA
Gene Ontologynucleus1 3
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000967 Zinc finger, NF-X1-type
IPR034078 Transcription factor NFX1 family
Mapman id Description
15.5.51.5 RNA biosynthesis.transcriptional regulation.transcriptional repression.transcriptional repressor (NF-X1)