Gene: SGA_v2.0_scaffold3G01631

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold3G01631
Transcript Identifier SGA_v2.0_scaffold3T01631
Gene Type Coding gene
Location scaffold3 : 1998585-2001270 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000622
#Genes/#Species 916/100
Phylogenetic origin

ID ORTHO05D000475
#Genes/#Species 879/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0090332	ISO	PLAZA Integrative Orthology	stomatal closure	AT5G48650
GO:1900425	ISO	PLAZA Integrative Orthology	negative regulation of defense response to bacterium	AT5G48650

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G03640

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009506	ISO	PLAZA Integrative Orthology	plasmodesma	AT3G07250
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT5G48650
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G48650

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR002075	Nuclear transport factor 2
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily
IPR032710	NTF2-like domain superfamily
IPR018222	Nuclear transport factor 2, eukaryote
IPR000504	RNA recognition motif domain
IPR039539	Ras GTPase-activating protein-binding protein

Mapman id	Description
16.8.1	RNA processing.mRNA sequestration.mRNA endoribonuclease (G3BP)