Gene: SGA_v2.0_scaffold32G12977

General Information

Structural Information

Species Striga asiatica
Gene Identifier SGA_v2.0_scaffold32G12977
Transcript Identifier SGA_v2.0_scaffold32T12977
Gene Type Coding gene
Location scaffold32 : 308541-309200 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000203
#Genes/#Species 1948/93
Phylogenetic origin

ID ORTHO05D000135
#Genes/#Species 1747/91
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

Descriptions

Short descriptions
Ortholog descriptions

product MADS-box transcription factor family protein

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045944	IEA	InterPro	positive regulation of transcription by RNA polymerase II
GO:2000012	ISO	PLAZA Integrative Orthology	regulation of auxin polar transport	AT5G60440
GO:0009553	ISO	PLAZA Integrative Orthology	embryo sac development	AT1G65360
GO:0009960	ISO	PLAZA Integrative Orthology	endosperm development	AT5G60440
GO:0009559	ISO	PLAZA Integrative Orthology	embryo sac central cell differentiation	AT2G24840
GO:0009658	ISO	PLAZA Integrative Orthology	chloroplast organization	AT1G65360
GO:0009911	ISO	PLAZA Integrative Orthology	positive regulation of flower development	AT1G01530

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000977	IEA	InterPro	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677	IEA	InterPro	DNA binding
GO:0046983	IEA	InterPro	protein dimerization activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT2G24840

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT2G24840
GO:0043078	ISO	PLAZA Integrative Orthology	polar nucleus	AT2G24840
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G36590

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR033896	MADS MEF2-like
IPR002100	Transcription factor, MADS-box
IPR036879	Transcription factor, MADS-box superfamily

Mapman id	Description
15.5.14	RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)