Gene: AT2G24840
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G24840
- Transcript Identifier AT2G24840.1
- Gene Type Coding gene
- Location Chr2 : 10581082-10581876 : positive
Gene Family Information
- ID HOM05D000203
- #Genes/#Species 1948/93
- Phylogenetic origin
- ID ORTHO05D000135
- #Genes/#Species 1747/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT2G24840.1
- symbol AGL61
- Alias DIA,DIANA
- uniprot Q4PSU4
Descriptions
- Description AGAMOUS-like 61
- Computational description AGAMOUS-like 61 (AGL61); CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 62 (TAIR:AT5G60440.1); Has 5781 Blast hits to 5781 proteins in 683 species: Archae - 0; Bacteria - 0; Metazoa - 624; Fungi - 302; Plants - 4788; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | Gene Ontology | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 1 |
| GO:0009559 | IMP | Gene Ontology | embryo sac central cell differentiation | 2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 1 |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0046983 | IEA | Gene Ontology | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 1 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 2 |
| GO:0043078 | IDA | Gene Ontology | polar nucleus | 4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |