Gene: SGA_v2.0_scaffold223G42875

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold223G42875
  • Transcript Identifier SGA_v2.0_scaffold223T42875
  • Gene Type Coding gene
  • Location scaffold223 : 453542-455161 : positive

Gene Family Information

  • ID HOM05D000128
  • #Genes/#Species 2706/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product FAD-binding Berberine family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G20830
GO:0071456
ISO
PLAZA Integrative Orthologycellular response to hypoxia AT1G26410
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G20830
GO:0010729
ISO
PLAZA Integrative Orthologypositive regulation of hydrogen peroxide biosynthetic process AT4G20860
GO:0009753
ISO
PLAZA Integrative Orthologyresponse to jasmonic acid AT2G34810
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT2G34810
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G44440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IEA
InterProoxidoreductase activity
GO:0016899
ISO
PLAZA Integrative Orthologyoxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor AT1G01980
GO:0050660
IEA
InterProflavin adenine dinucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G20830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G20830
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT4G20830
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G20830
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G20830
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G01980
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G44410
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G01980
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G26380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006094 FAD linked oxidase, N-terminal
IPR016167 FAD-binding, type PCMH, subdomain 1
IPR016169 FAD-binding, type PCMH, subdomain 2
IPR012951 Berberine/berberine-like
IPR036318 FAD-binding, type PCMH-like superfamily
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor