Gene: SGA_v2.0_scaffold202G41477

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold202G41477
  • Transcript Identifier SGA_v2.0_scaffold202T41477
  • Gene Type Coding gene
  • Location scaffold202 : 451907-471442 : positive

Gene Family Information

  • ID HOM05D000789
  • #Genes/#Species 750/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product nuclear factor Y, subunit C2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT1G08970
GO:0009740
ISO
PLAZA Integrative Orthologygibberellic acid mediated signaling pathway AT1G08970
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT1G54830
GO:2000306
ISO
PLAZA Integrative Orthologypositive regulation of photomorphogenesis AT1G08970
GO:0009738
ISO
PLAZA Integrative Orthologyabscisic acid-activated signaling pathway AT1G08970
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G08970
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G08970
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G08970
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT1G54830
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G08970
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G08970
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08970
GO:0016602
IEA
InterProCCAAT-binding factor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR027170 Transcriptional activator HAP5 subunit
IPR007125 Histone H2A/H2B/H3
Mapman id Description
35.1 not assigned.annotated