Gene: AT1G08970

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G08970
  • Transcript Identifier AT1G08970.2
  • Gene Type Coding gene
  • Location Chr1 : 2883144-2883839 : positive

Gene Family Information

  • ID HOM05D000789
  • #Genes/#Species 750/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G08970.2
  • symbol NF-YC9
  • Alias HAP5C,HEME ACTIVATED PROTEIN 5C
  • full_name nuclear factor Y%2C subunit C9
  • uniprot Q8L4B2

Descriptions

  • Description nuclear factor Y, subunit C9
  • Computational description nuclear factor Y, subunit C9 (NF-YC9); CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 1343 Blast hits to 1343 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 451; Fungi - 349; Plants - 427; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
  • Computational description nuclear factor Y, subunit C9 (NF-YC9); CONTAINS InterPro DOMAIN/s: Histone-fold (InterPro:IPR009072), Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C3 (TAIR:AT1G54830.3); Has 1345 Blast hits to 1345 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 451; Fungi - 351; Plants - 427; Viruses - 0; Other Eukaryotes - 116 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048574
ISO
PLAZA Integrative Orthologylong-day photoperiodism, flowering AT1G54830
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0006355
IBA
Gene Ontologyregulation of transcription, DNA-templated1
GO:2000306
IMP
Gene Ontologypositive regulation of photomorphogenesis2
GO:0010029
IGI
Gene Ontologyregulation of seed germination3
GO:0009740
IGI
Gene Ontologygibberellic acid mediated signaling pathway3
GO:0009738
IGI
Gene Ontologyabscisic acid-activated signaling pathway3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003712
ISO
PLAZA Integrative Orthologytranscription coregulator activity AT1G54830
GO:0046982
IEA
Gene Ontologyprotein heterodimerization activity
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0001228
IBA
Gene OntologyDNA-binding transcription activator activity, RNA polymerase II-specific1
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding3
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding4
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
HDA
Gene Ontologyextracellular region7
GO:0005634
IDA
IEA
GOA Databasenucleus
GO:0005634
HDA
ISM, IBA
Gene Ontologynucleus1 8
GO:0005737
IDA
GOA Databasecytoplasm
GO:0005737
HDA
Gene Ontologycytoplasm8
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009072 Histone-fold
IPR003958 Transcription factor CBF/NF-Y/archaeal histone domain
Mapman id Description
15.5.49.3 RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YC