Gene: SGA_v2.0_scaffold106G30533

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold106G30533
  • Transcript Identifier SGA_v2.0_scaffold106T30533
  • Gene Type Coding gene
  • Location scaffold106 : 115582-117628 : negative

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Tubulin beta chain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G12250
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT2G29550
GO:0007017
IEA
InterPromicrotubule-based process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G12250
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G20010
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
InterProGTP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT2G29550
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G29550
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G20010
GO:0045298
ISO
PLAZA Integrative Orthologytubulin complex AT5G62700
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G29550
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G12250
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G20010
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT2G29550
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G20010
GO:0005874
IEA
InterPromicrotubule

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002453 Beta tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR023123 Tubulin, C-terminal
IPR000217 Tubulin
IPR003008 Tubulin/FtsZ, GTPase domain
IPR008280 Tubulin/FtsZ, C-terminal
Mapman id Description
20.1.1.2 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin