Gene: Rhsim13G0026300
General Information
Structural Information
- Species Rhododendron simsii
- Gene Identifier Rhsim13G0026300
- Transcript Identifier Rhsim13G0026300.1
- Gene Type Coding gene
- Location chr13 : 2533106-2548926 : positive
Gene Family Information
- ID HOM05D000366
- #Genes/#Species 1311/100
- Phylogenetic origin
- ID ORTHO05D001950
- #Genes/#Species 333/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Rhsim13G0026300.1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006412 | IEA | InterPro | translation | |
| GO:0045892 | IEA | InterPro | negative regulation of transcription, DNA-templated | |
| GO:0006413 | ISO | PLAZA Integrative Orthology | translational initiation | AT1G22780 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003714 | IEA | InterPro | transcription corepressor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G34030 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G22780 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0015935 | ISO | PLAZA Integrative Orthology | small ribosomal subunit | AT4G09800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003851 | Zinc finger, Dof-type |
| IPR001892 | Ribosomal protein S13 |
| IPR032308 | Jas TPL-binding domain |
| IPR001965 | Zinc finger, PHD-type |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR010979 | Ribosomal protein S13-like, H2TH |
| IPR027437 | 30s ribosomal protein S13, C-terminal |
| IPR042163 | PHD finger protein 12 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Mapman id | Description |
|---|---|
| 15.5.1.5 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (DOF) |
| 17.1.3.1.20 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS18 |