Gene: RcHm_v2.0_Chr5g0008771

General Information

Structural Information

  • Species Rosa chinensis
  • Gene Identifier RcHm_v2.0_Chr5g0008771
  • Transcript Identifier RcHm_v2.0_Chr5g0008771
  • Gene Type Coding gene
  • Location RcHm_v2.0_Chr5 : 5740020-5741015 : negative

Gene Family Information

  • ID HOM05D001107
  • #Genes/#Species 553/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010262
ISO
PLAZA Integrative Orthologysomatic embryogenesis AT1G28300
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering Os01g0713600
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G28300
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G28300
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated Os08g0101000
GO:0010601
ISO
PLAZA Integrative Orthologypositive regulation of auxin biosynthetic process AT1G28300
GO:0010431
ISO
PLAZA Integrative Orthologyseed maturation AT1G28300
GO:0010344
ISO
PLAZA Integrative Orthologyseed oilbody biogenesis AT1G28300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D001107
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding Os08g0101000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os08g0101000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003340 B3 DNA binding domain
IPR044800 B3 domain-containing transcription factor LEC2-like
IPR015300 DNA-binding pseudobarrel domain superfamily
Mapman id Description
15.5.5.5 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (LAV-ABI3)