Gene: AT1G28300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G28300
  • Transcript Identifier AT1G28300.1
  • Gene Type Coding gene
  • Location Chr1 : 9897054-9899838 : negative

Gene Family Information

  • ID HOM05D001836
  • #Genes/#Species 356/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G28300.1
  • symbol LEC2
  • Alias AtLEC2
  • full_name LEAFY COTYLEDON 2
  • uniprot Q1PFR7

Descriptions

  • Description AP2/B3-like transcriptional factor family protein
  • Computational description LEAFY COTYLEDON 2 (LEC2); CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT3G26790.1); Has 515 Blast hits to 514 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 515; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010262
IMP
Gene Ontologysomatic embryogenesis1
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy2
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated3
GO:0010344
IMP
Gene Ontologyseed oilbody biogenesis4
GO:0010431
IMP
Gene Ontologyseed maturation4
GO:0010601
IMP
Gene Ontologypositive regulation of auxin biosynthetic process4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
GOA DatabaseDNA-binding transcription factor activity
GO:0003700
IDA
ISS
Gene OntologyDNA-binding transcription factor activity3 5
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IDA
Gene OntologyDNA binding3
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044800 B3 domain-containing transcription factor LEC2-like
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR003340 B3 DNA binding domain
Mapman id Description
15.5.5.5 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (LAV-ABI3)