Gene: RcHm_v2.0_Chr1g0324791
General Information
Structural Information
- Species Rosa chinensis
- Gene Identifier RcHm_v2.0_Chr1g0324791
- Transcript Identifier RcHm_v2.0_Chr1g0324791
- Gene Type Coding gene
- Location RcHm_v2.0_Chr1 : 12560166-12561665 : positive
Gene Family Information
- ID HOM05D001374
- #Genes/#Species 455/100
- Phylogenetic origin
- ID ORTHO05D004296
- #Genes/#Species 184/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043039 | IEA | InterPro | tRNA aminoacylation | |
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0005975 | ISO | PLAZA Homology (enrichment) | carbohydrate metabolic process | HOM05D001374 |
| GO:0009298 | ISO | PLAZA Homology (enrichment) | GDP-mannose biosynthetic process | HOM05D001374 |
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT1G25350 |
| GO:0006412 | ISO | PLAZA Integrative Orthology | translation | AT1G25350 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D001374 |
| GO:0004476 | ISO | PLAZA Homology (enrichment) | mannose-6-phosphate isomerase activity | HOM05D001374 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR042558 | Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 1 |
| IPR000924 | Glutamyl/glutaminyl-tRNA synthetase |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR007639 | Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal |
| IPR020058 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain |
| IPR042559 | Glutaminyl-tRNA synthetase, class Ib, non-specific RNA-binding domain, N-terminal, subdomain 2 |
| Mapman id | Description |
|---|---|
| 50.6.1 | Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond |