Gene: RcHm_v2.0_Chr1g0324801
General Information
Structural Information
- Species Rosa chinensis
- Gene Identifier RcHm_v2.0_Chr1g0324801
- Transcript Identifier RcHm_v2.0_Chr1g0324801
- Gene Type Coding gene
- Location RcHm_v2.0_Chr1 : 12561716-12562513 : positive
Gene Family Information
- ID HOM05D001374
- #Genes/#Species 455/100
- Phylogenetic origin
- ID ORTHO05D004296
- #Genes/#Species 184/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
GO:0006412 | IEA | InterPro | translation | |
GO:0005975 | ISO | PLAZA Homology (enrichment) | carbohydrate metabolic process | HOM05D001374 |
GO:0009298 | ISO | PLAZA Homology (enrichment) | GDP-mannose biosynthetic process | HOM05D001374 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0000166 | IEA | InterPro | nucleotide binding | |
GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0008270 | ISO | PLAZA Homology (enrichment) | zinc ion binding | HOM05D001374 |
GO:0004476 | ISO | PLAZA Homology (enrichment) | mannose-6-phosphate isomerase activity | HOM05D001374 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005737 | IEA | InterPro | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR020059 | Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain |
IPR020061 | Glutamine-tRNA ligase, alpha-bundle domain superfamily |
IPR020056 | Ribosomal protein L25/Gln-tRNA synthetase, N-terminal |
IPR011035 | Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily |
Mapman id | Description |
---|---|
17.2.6 | Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamine-tRNA ligase |