Gene: Pp3c8_6920
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c8_6920
- Transcript Identifier Pp3c8_6920V3.2
- Gene Type Coding gene
- Location Chr08 : 4017036-4020585 : positive
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- name Pp3c8_6920V3.2
- pacid 32966077
- alias Pp1s8_101V6
- alias Phypa_202186
- alias Phpat.008G025900
- uniprot A9RGL4
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0010152 | ISO | PLAZA Integrative Orthology | pollen maturation | AT1G22130 |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT1G22130 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT1G77980 |
| GO:0080092 | ISO | PLAZA Integrative Orthology | regulation of pollen tube growth | AT1G22130 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0003700 | ISO | PLAZA Homology (enrichment) | DNA-binding transcription factor activity | HOM05D000042 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G22130 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G77950 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |