Gene: AT1G77980
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT1G77980
- Transcript Identifier AT1G77980.1
- Gene Type Coding gene
- Location Chr1 : 29315212-29317067 : negative
Gene Family Information
- ID HOM05D004532
- #Genes/#Species 159/69
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT1G77980.1
- symbol AGL66
- uniprot Q1PFC2
Descriptions
- Description AGAMOUS-like 66
- Computational description AGAMOUS-like 66 (AGL66); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, pollen development; LOCATED IN: nucleus; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 104 (TAIR:AT1G22130.1); Has 6165 Blast hits to 6165 proteins in 753 species: Archae - 0; Bacteria - 2; Metazoa - 622; Fungi - 302; Plants - 5159; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009555 | IMP, IGI IBA | Gene Ontology | pollen development | 1 2 3 |
| GO:0045944 | IEA | Gene Ontology | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006357 | IBA | Gene Ontology | regulation of transcription by RNA polymerase II | 2 |
| GO:0080092 | IMP | Gene Ontology | regulation of pollen tube growth | 1 |
| GO:0010152 | IMP | Gene Ontology | pollen maturation | 1 |
| GO:0006355 | TAS | Gene Ontology | regulation of transcription, DNA-templated | 4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | Gene Ontology | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000981 | IBA | Gene Ontology | DNA-binding transcription factor activity, RNA polymerase II-specific | 2 |
| GO:0000978 | IBA | Gene Ontology | RNA polymerase II cis-regulatory region sequence-specific DNA binding | 2 |
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0003700 | ISS | Gene Ontology | DNA-binding transcription factor activity | 4 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Tree-based Orthology | cytosol | AT1G77950 |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |