Gene: AT1G77950

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G77950
  • Transcript Identifier AT1G77950.2
  • Gene Type Coding gene
  • Location Chr1 : 29307029-29309667 : positive

Gene Family Information

  • ID HOM05D004532
  • #Genes/#Species 159/69
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G77950.2
  • symbol AGL67
  • uniprot F4I8L6

Descriptions

  • Description AGAMOUS-like 67
  • Computational description AGAMOUS-like 67 (AGL67); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 5849 Blast hits to 5849 proteins in 680 species: Archae - 0; Bacteria - 0; Metazoa - 631; Fungi - 305; Plants - 4834; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).
  • Computational description AGAMOUS-like 67 (AGL67); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: AGAMOUS-like 66 (TAIR:AT1G77980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080092
ISO
PLAZA Tree-based Orthologyregulation of pollen tube growth AT1G22130
GO:0045944
ISO
PLAZA Homology (enrichment)positive regulation of transcription by RNA polymerase II HOM05D004532
GO:0006355
ISO
PLAZA Tree-based Orthologyregulation of transcription, DNA-templated AT1G77980
GO:0010152
ISO
PLAZA Tree-based Orthologypollen maturation AT1G22130
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II1
GO:0009555
IBA
Gene Ontologypollen development1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
ISO
PLAZA Homology (enrichment)RNA polymerase II transcription regulatory region sequence-specific DNA binding HOM05D004532
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific1
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002100 Transcription factor, MADS-box
IPR036879 Transcription factor, MADS-box superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)