Gene: Pp3c3_33560

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c3_33560
  • Transcript Identifier Pp3c3_33560V3.6
  • Gene Type Coding gene
  • Location Chr03 : 22574439-22580733 : positive

Gene Family Information

  • ID HOM05D000412
  • #Genes/#Species 1233/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c3_33560V3.6
  • pacid 32940957
  • alias Phypa_27261
  • alias Pp1s198_172V6
  • alias Phypa_143061
  • uniprot A0A2K1KX45

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061157
IBA
GOA DatabasemRNA destabilization
GO:0019722
ISO
PLAZA Integrative Orthologycalcium-mediated signaling AT3G03950

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G13460
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G55500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009060 UBA-like superfamily
IPR000626 Ubiquitin-like domain
IPR007275 YTH domain
IPR029071 Ubiquitin-like domain superfamily
IPR015940 Ubiquitin-associated domain
Mapman id Description
16.5.8.2.1 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine methylation reading.methylation reader (ECT)
19.2.4.2.4.1 Protein homeostasis.ubiquitin-proteasome system.membrane-associated protein degradation.ER-associated protein degradation (ERAD).delivery to proteasome.ubiquitin shuttling factor (RAD23)