Gene: Pp3c24_19980

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c24_19980
  • Transcript Identifier Pp3c24_19980V3.3
  • Gene Type Coding gene
  • Location Chr24 : 13268055-13270975 : negative

Gene Family Information

  • ID HOM05D000495
  • #Genes/#Species 1074/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c24_19980V3.3
  • pacid 32908632
  • alias Phypa_228446
  • alias Pp1s1821_1V6
  • alias Phpat.024G073400
  • uniprot A9U6K2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009251
IBA
GOA Databaseglucan catabolic process
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT5G04885
GO:0005975
IEA
GOA Databasecarbohydrate metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0008152
IEA
GOA Databasemetabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009044
ISO
PLAZA Integrative Orthologyxylan 1,4-beta-xylosidase activity AT3G62710
GO:0004553
IEA
GOA Databasehydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008422
IBA
IEA
GOA Databasebeta-glucosidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016798
IEA
GOA Databasehydrolase activity, acting on glycosyl bonds
GO:0102483
IEA
GOA Databasescopolin beta-glucosidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031225
ISO
PLAZA Integrative Orthologyanchored component of membrane AT5G04885
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04885
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G47050
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT5G20950
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G47000
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT5G20950
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G20950
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G20950

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR017853 Glycoside hydrolase superfamily
IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily
IPR001764 Glycoside hydrolase, family 3, N-terminal
IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily
IPR002772 Glycoside hydrolase family 3 C-terminal domain
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase